The detailed information of tRNA gene sequence


Sequence ID>W09105054
Genome IDAAOM01000011
Search identical group
Phylum/ClassChloroflexota
SpeciesDehalococcoides mccartyi BAV1 [AAOM]
Start position on genome 6578
End posion on genome 6652
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccctttacaT
tRNA gene sequence 
GGGGCTGTAGCTTAGTTGGGAGAGCGCTGCGTTCGCAACGCAGAGGTCAGGGGTTCGAAG
CCCCTCAGCTCCATtt
Downstream region at tRNA end position 
ttctgttact
Secondary structure (Cloverleaf model)
>W09105054	Ala	CGC
                   T      ATtt ttctgttact
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          G A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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