The detailed information of tRNA gene sequence


Sequence ID>W141803641
Genome IDJPGV01000030
Search identical group
Phylum/ClassChlorobiota
Species[Candidatus Thermochlorobacteriaceae] bacterium GBChlB GBChlB [JPGV]
Start position on genome 36554
End posion on genome 36645
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgatagtttt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTTAAGGCGTCGGTTTGCTAAACCGATGTAGTATCGTAAGGT
GCTACCGGGGGTTCGAATCCCCCCTTCTCCGCgc
Downstream region at tRNA end position 
aaactaagca
Secondary structure (Cloverleaf model)
>W141803641	Ser	GCT
                   t      GCgc aaactaagca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTAGTATCGTAAGGTGCTACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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