The detailed information of tRNA gene sequence


Sequence ID>W141804712
Genome IDJPIM01000021
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexus sp. MS-G [JPIM]
Start position on genome 39994
End posion on genome 40087
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aatctcgatt
tRNA gene sequence 
GAGAGCGCATATGGCCCGGTGGCTGTCACGGTCTTCAAAACCGTTGGGCGGAGTGACGAA
CTGCGCCGGTGGGTTCGACTCCCACGCGCTCTCGaaa
Downstream region at tRNA end position 
gcgtgagaga
Secondary structure (Cloverleaf model)
>W141804712	SeC(p)	TCA
                   t      Gaaa gcgtgagaga
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       G G T A       G T G G G     C
    G       | + + |                 T T
    T       C T G T
      G G          C     TGGGCGGAGTGACGAACTGCGCCG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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