The detailed information of tRNA gene sequence


Sequence ID>W09119918
Genome IDACEE01000006
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus S110 [ACEE]
Start position on genome 154410
End posion on genome 154335
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ggtttgcgtt
tRNA gene sequence 
GGGGGGGTAGCTCAGCTGGGAGAGCGCCGCGTTCGCAATGCGGAGGTCGTGAGTTCGATC
CTCATCCTCTCCACCA
Downstream region at tRNA end position 
tcccatcaaa
Secondary structure (Cloverleaf model)
>W09119918	Ala	CGC
                   t      ACCA tcccatcaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     G - C          C T
                    T     T A C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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