The detailed information of tRNA gene sequence


Sequence ID>W141806665
Genome IDJPMI01000228
Search identical group
Phylum/ClassMyxococcota
SpeciesArchangium violaceum Cb vi76 [JPMI]
Start position on genome 52405
End posion on genome 52330
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggttctagg
tRNA gene sequence 
GGGCCCTTAGCTCAGCGGTCAGAGCTGTCGGCTCATAACCGATTGGTCCCTGGTTCGAAT
CCAGGAGGGCCCACCC
Downstream region at tRNA end position 
cctttaacct
Secondary structure (Cloverleaf model)
>W141806665	Met	CAT
                   g      ACCC cctttaacct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      C A          T     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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