The detailed information of tRNA gene sequence


Sequence ID>W141810152
Genome IDJPSP01000004
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCandidatus Atelocyanobacterium thalassa thalassa isolate SIO64986 [JPSP]
Start position on genome 55965
End posion on genome 56040
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtgcgttatT
tRNA gene sequence 
GGCTCAGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAAGCCCAAGGTCGGGTGTTCAAA
TCACCCTTGAGCCATat
Downstream region at tRNA end position 
tctatggcct
Secondary structure (Cloverleaf model)
>W141810152	Met	CAT
                   T      ATat tctatggcct
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     G + T          T A
                    T     C C C A C     A
      T G A        A      | | | | |     A
    T       C T C G       G G G T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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