The detailed information of tRNA gene sequence


Sequence ID>W141810169
Genome IDJPSP01000015
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCandidatus Atelocyanobacterium thalassa thalassa isolate SIO64986 [JPSP]
Start position on genome 29944
End posion on genome 30032
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attgtatccT
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAAGCGGCTTCCTGCTAAGAAGTTATAGGTTAACGCCTA
TCGAGGGTTCGAATCCCTCCCTCTCCGTtc
Downstream region at tRNA end position 
gttttgtttt
Secondary structure (Cloverleaf model)
>W141810169	Ser	GCT
                   T      GTtc gttttgtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATAGGTTAACGCCTATC
                    G + T
                    C - G
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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