The detailed information of tRNA gene sequence


Sequence ID>W141817090
Genome IDJQKJ01000012
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfobacter vibrioformis DSM 8776 [JQKJ]
Start position on genome 98478
End posion on genome 98575
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcgacattgc
tRNA gene sequence 
GGAAGCACGCGGCTCGCTGGTGGGGCCCTCGGACTTCAAATCCGATGTGGGGAGTTAATA
CCTTCCCGGGTAGGTTCGATTCCTATGTGCTTCCGCCA
Downstream region at tRNA end position 
tttttgtaag
Secondary structure (Cloverleaf model)
>W141817090	SeC(p)	TCA
                   c      GCCA tttttgtaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G          T T
                    G     T A T C C     A
      C G C        C      + | | | |     G
    T       T C G G       G T A G G     C
    G       + | | |                 T T
    G       G G C C
      T G G        C     TGTGGGGAGTTAATACCTTCCCGG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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