The detailed information of tRNA gene sequence


Sequence ID>W141819851
Genome IDJQMM01000001
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPorticoccus hydrocarbonoclasticus MCTG13d [JQMM]
Start position on genome 426517
End posion on genome 426442
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtgacgcgac
tRNA gene sequence 
AGGCCAGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCTGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
atcttaatcc
Secondary structure (Cloverleaf model)
>W141819851	Trp	CCA
                   c      GCCA atcttaatcc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     CTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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