The detailed information of tRNA gene sequence


Sequence ID>W141820022
Genome IDJQMP01000003
Search identical group
Phylum/ClassThermomicrobiota
SpeciesThermorudis peleae KI4 [JQMP]
Start position on genome 1153782
End posion on genome 1153873
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgaatatgt
tRNA gene sequence 
GGAAGGGTCGCATAGTTGGCCGAGTGCGCGCGACTGGAAATCGCGTGGGCGTGATGAGCG
CCTCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
cgatttttcc
Secondary structure (Cloverleaf model)
>W141820022	Ser	GGA
                   t      GCCA cgatttttcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G T G G G     C
  G         + | | |                 T T
  C         G T G C
    C G A          G     TGGGCGTGATGAGCGCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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