The detailed information of tRNA gene sequence


Sequence ID>W141820024
Genome IDJQMP01000003
Search identical group
Phylum/ClassThermomicrobiota
SpeciesThermorudis peleae KI4 [JQMP]
Start position on genome 1243534
End posion on genome 1243610
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
caccgtgtaa
tRNA gene sequence 
CGGGGAGTGGCGCAGCCCGGTTTAGCGCGCCGCGTTCGGGACGCGGAGGTCGGAGGTTCA
AATCCTCTCTCCCCGACat
Downstream region at tRNA end position 
gagagggcga
Secondary structure (Cloverleaf model)
>W141820024	Pro	CGG
                   a      ACat gagagggcga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
    C C G A        G      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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