The detailed information of tRNA gene sequence


Sequence ID>W141820028
Genome IDJQMP01000003
Search identical group
Phylum/ClassThermomicrobiota
SpeciesThermorudis peleae KI4 [JQMP]
Start position on genome 1461214
End posion on genome 1461288
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gccaggaact
tRNA gene sequence 
GGGTGAGTAGCTCAGCTGGTTAGAGCGCGCGGTTCACATCCGCGAGGTCAGGGGTTCAAG
TCCCTTCTCACCCACtt
Downstream region at tRNA end position 
tgtgtattgg
Secondary structure (Cloverleaf model)
>W141820028	Val	CAC
                   t      ACtt tgtgtattgg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     T T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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