The detailed information of tRNA gene sequence


Sequence ID>W141820573
Genome IDJQMY01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOceanicola sp. MCTG156(1a) [JQMY]
Start position on genome 1548614
End posion on genome 1548525
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccacacgtgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGTGGGTGCAAGCCCA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
cttgcctttc
Secondary structure (Cloverleaf model)
>W141820573	Ser	CGA
                   c      GCCA cttgcctttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGGGTGCAAGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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