The detailed information of tRNA gene sequence


Sequence ID>W09107130
Genome IDABFI01000008
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobaculum sp. Y04AAS1 [ABFI]
Start position on genome 12610
End posion on genome 12538
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtaatataaa
tRNA gene sequence 
GGCGGTATAGCTCAGGGGCTAGAGCGGAGATCTCATAAGTCTTAGGTCGGAGGTTCGAAT
CCTCCTACCGCCAttt
Downstream region at tRNA end position 
ttattttata
Secondary structure (Cloverleaf model)
>W09107130	Met	CAT
                   a      Attt ttattttata
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C C T C C     A
      G G A        A      | | | | |     G
    G       C T C G       G G A G G     C
    G       | | | |                 T T
    C       G A G C
      T A          G     AGGTC
                    G + T
                    A - T
                    G - C
                    A - T
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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