The detailed information of tRNA gene sequence


Sequence ID>W09109858
Genome IDABUQ01000001
Search identical group
Phylum/ClassThermomicrobiota
SpeciesSphaerobacter thermophilus DSM 20745 [ABUQ]
Start position on genome 643193
End posion on genome 643267
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatccaaggc
tRNA gene sequence 
GGGCCTGTAGCTCAGCGGCAGAGCAAGGGGCTCATAACCTCAAGGTCGTAGGTTCGAATC
CTACCAGGCCCACCG
Downstream region at tRNA end position 
gcgcaacggg
Secondary structure (Cloverleaf model)
>W09109858	Met	CAT
                   c      ACCG gcgcaacggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTC
                    A   A
                    G - C
                    G + T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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