The detailed information of tRNA gene sequence


Sequence ID>W141829170
Genome IDJRFF01000053
Search identical group
Phylum/ClassMycoplasmatota
SpeciesCandidatus Izimaplasma bacterium HR2 HR2 [JRFF]
Start position on genome 102237
End posion on genome 102150
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcccttatac
tRNA gene sequence 
GGAGATATGACAGAGAGGTAATGTAGCGGTTTGCTAAACCGTCGTCGAGGTAACACTCGC
CTGGGTTCGATTCCCAGTATCTCCGCCA
Downstream region at tRNA end position 
ataagttaag
Secondary structure (Cloverleaf model)
>W141829170	Ser	GCT
                   c      GCCA ataagttaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     G A C C C     A
        G A        G      | | | | |     G
      A     G A C A       C T G G G     C
      G       | | |                 T T
      G     A T G T
        T A        A     CGTCGAGGTAACACTCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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