The detailed information of tRNA gene sequence


Sequence ID>W142001151
Genome IDJOMG01000002
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesPelobacter seleniigenes DSM 18267 [JOMG]
Start position on genome 1107988
End posion on genome 1108083
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
atcgtgctaa
tRNA gene sequence 
GGAGGTAGTCAGCCCTCTGGTGAGGCTCACGGTCTTCAAAACCGATGGGGGGCGTATCCC
GTCCCTGGTGTGTTCGATTCACATCTACCTCCGCCA
Downstream region at tRNA end position 
agccaataaa
Secondary structure (Cloverleaf model)
>W142001151	seC	TCA
                   a      GCCA agccaataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    T     T A C A C     A
      C T C        C      + | | | |     G
    T       C C G A       G T G T G     C
    G       | | | |                 T T
    G       G G C T
      T G A        C     TGGGGGGCGTATCCCGTCCCTG
                    A   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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