The detailed information of tRNA gene sequence


Sequence ID>W142000715
Genome IDCCSF01000001
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas saudiphocaensis 20_BN [CCSF]
Start position on genome 2875033
End posion on genome 2874938
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
aaatctatat
tRNA gene sequence 
GGAAGGCAATCGCAGCCGGTGCTGCGGCCGGGCTTCAAACCCGGTTGGGGGCGGCAGCCG
CTCCTGGGTGAGTTCGACTCTCACTGCCTTCCGCCA
Downstream region at tRNA end position 
attcgcttcc
Secondary structure (Cloverleaf model)
>W142000715	seC	TCA
                   t      GCCA attcgcttcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    A     C A C T C     A
      C C G        T      | | | | |     G
    G       A C G C       G T G A G     C
    G       | | | |                 T T
    T       T G C G
      G C          G     TTGGGGGCGGCAGCCGCTCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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