The detailed information of tRNA gene sequence


Sequence ID>W142001219
Genome IDJQJQ01000005
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas sp. PTA1 [JQJQ]
Start position on genome 286200
End posion on genome 286295
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
cctgagttca
tRNA gene sequence 
GGAAGACAATCGCGCCCGGTGGCGCGGCCGGGCTTCAAACCCGGTTGGGGACGGCATCCG
TTCCCGGGCAGGTTCGACTCCGGCTGTCTTCCGCCA
Downstream region at tRNA end position 
gtctcccaaa
Secondary structure (Cloverleaf model)
>W142001219	seC	TCA
                   a      GCCA gtctcccaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     C - G
                     A - T          T C
                    A     C G G C C     A
      C C C        T      | |   | |     G
    G       G C G C       G C A G G     C
    G       | | | |                 T T
    T       C G C G
      G G          G     TTGGGGACGGCATCCGTTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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