The detailed information of tRNA gene sequence


Sequence ID>W142001017
Genome IDJMCC01000112
Search identical group
Phylum/ClassMyxococcota
SpeciesEnhygromyxa salina [JMCC]
Start position on genome 21411
End posion on genome 21313
Amino Acid seC
Anticodon TCA
Upstream region at tRNA start position 
agtcgagcgt
tRNA gene sequence 
GGTAGGGCCTCCGGATCTGGTGGCCGGCCCGGTCTTCAAAACCGGTGAGGGGCCGTGAGA
ACGGTCCCTGGTGAGTTCGATTCTCATGCCCTACCGCCA
Downstream region at tRNA end position 
ctatttcccc
Secondary structure (Cloverleaf model)
>W142001017	seC	TCA
                   t      GCCA ctatttcccc
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T T
                    C     T A C T C     A
      C T A        T      + | | | |     G
    T       G G C C       G T G A G     C
    G       | | | |                 T T
    G       C C G G
      T G G        C     TGAGGGGCCGTGAGAACGGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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