The detailed information of tRNA gene sequence


Sequence ID>W143017353
Genome IDJNNH01000043
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ferriphilum [JNNH]
Start position on genome 16870
End posion on genome 16948
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
accaatcaac
tRNA gene sequence 
GCAGCGATAGCTCAGTTCATGGTAGAGCACCGGTTTGAAGAGCCGGGTGTCGCCGGTTCA
ACTCCGGCTCGCTGCACCA
Downstream region at tRNA end position 
ttttgtaaca
Secondary structure (Cloverleaf model)
>W143017353	Phe	GAA
                   c      ACCA ttttgtaaca
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T C
                    T     C G G C C     A
    T T G A        A      | | | | |     A
  C         C T C G       G C C G G     C
  A         | | | |                 T T
  T         G A G C
    G G T A        A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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