The detailed information of tRNA gene sequence


Sequence ID>W143001384
Genome IDASAK01000005
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPlanktothrix agardhii NIVA-CYA 126/8 [ASAK]
Start position on genome 1217869
End posion on genome 1217941
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aataaactaa
tRNA gene sequence 
GGCTCAGTAGCTCAGTGGTTAGAGCAGGGGACTCATAAGCCCAAGGTCGCAGGTTCAAAT
CCCGCTTGAGCCAttt
Downstream region at tRNA end position 
gaaactatag
Secondary structure (Cloverleaf model)
>W143001384	Met	CAT
                   a      Attt gaaactatag
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     G + T          T A
                    T     C G C C C     A
      T G A        A      | |   | |     A
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTC
                    G   A
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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