The detailed information of tRNA gene sequence


Sequence ID>W143018577
Genome IDJOMJ01000003
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfohalovibrio reitneri L21-Syr-AB [JOMJ]
Start position on genome 862702
End posion on genome 862607
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcccacgc
tRNA gene sequence 
GGAGAGGTAGCGAAGTCCGGTCGTAACGCGCTCGACTCGAAATCGAGTTACGGGTTAGTA
GCCCGTACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tcgactattt
Secondary structure (Cloverleaf model)
>W143018577	Ser	CGA
                   c      GCCA tcgactattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
        G A        A      | | | | |     G
      T     A G C G       G T G G G     C
      C     | | | +                 T T
      C     T C G T
        G G        A     TCGAGTTACGGGTTAGTAGCCCGTAC
                    A   A
                    C   A
                    G   A
                    C - G
                    G - C
                  C       T
                  T       C
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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