The detailed information of tRNA gene sequence


Sequence ID>W143001252
Genome IDAOXI01000015
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSalmonella enterica subsp. indica serovar 6 1121 [AOXI]
Start position on genome 124939
End posion on genome 124852
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
nnnCATGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGT
ATCGGGGGTTCGAATCCCCCCCTCACCGCCA
Downstream region at tRNA end position 
tatttaagtt
Secondary structure (Cloverleaf model)
>W143001252	Ser	GGA
                   n      GCCA tatttaagtt
                     n   C
                     n   C
                     n   A
                     C   C
                     A - T
                     T   C
                     G - C          T A
                    A     C C C C C     A
    A G C C        G      | | | | |     G
  G         T G T G       G G G G G     C
  T         |   +                   T T
  G         A A G G
    G C T G        A     GTATACGGCAACGTATC
                    G + T
                    C - G
                    A - T
                    C - G
                    G   A
                  C       A
                  C       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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