The detailed information of tRNA gene sequence


Sequence ID>W143005179
Genome IDBBIN01000216
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas sp. '520P1 No. 412' [BBIN]
Start position on genome 20661
End posion on genome 20748
Amino Acid Pseudo
Anticodon TGA
Upstream region at tRNA start position 
agaacaatgc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCACCGGTCTTGAAAACCGGCATGGGTTTATAGCCC
ATCTAGGGTTCAAATCCCTATCTCTACTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>W143005179	Pseudo	TGA
                   c      Tnnn nnnnnnnnnn
                     G - C
                     G   A
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G A C G       T A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CATGGGTTTATAGCCCATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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