The detailed information of tRNA gene sequence


Sequence ID>W143004974
Genome IDBATR01000093
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobium sp. BvORR106 [BATR]
Start position on genome 97925
End posion on genome 97850
Amino Acid Pseudo
Anticodon TTC
Upstream region at tRNA start position 
cccctcactc
tRNA gene sequence 
GACCCCATCGTCTAATCAGCCAAGACCTTCGACTTTCTATCGAAGAATGCCGGTGCGAAT
CCGGCTGGGGTTGCCA
Downstream region at tRNA end position 
actttcccat
Secondary structure (Cloverleaf model)
>W143004974	Pseudo	TTC
                   c      GCCA actttcccat
                     G + T
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G G C C     A
      T A A        C      | | | | |     G
    C       T C T G       G C C G G     C
    A       | | | |                 T G
    G       A G A C
      C C A        C     GAAT
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       T
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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