The detailed information of tRNA gene sequence


Sequence ID>W1930039307
Genome IDQXFJ01000011
Search identical group
Phylum/ClassBacteroidota
SpeciesAllomuricauda aequoris NH166 [QXFJ]
Start position on genome 102253
End posion on genome 102325
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caactaaaac
tRNA gene sequence 
GGCATTGTGGTCGAATTGGATAGACAAGGTCCCGCAAGGATTTTTATGGTGGTTCGAGTC
CACCCGATGCCTCaa
Downstream region at tRNA end position 
agataaactt
Secondary structure (Cloverleaf model)
>W1930039307	Cys	GCA
                   c      TCaa agataaactt
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     T + G
                     G - C          T G
                    T     C C A C C     A
      T A A        G      | | | | |     G
    T       G C T G       G G T G G     C
    G         | | |                 T T
    G       A G A C
      A T          A     TTAT
                    A - T
                    G + T
                    G + T
                    T - A
                    C - G
                  C       G
                  C       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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