The detailed information of tRNA gene sequence


Sequence ID>W1930009742
Genome IDJJQU01000082
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina mazei 1.H.M.2.1 [JJQU]
Start position on genome 11510
End posion on genome 11439
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agacagactt
tRNA gene sequence 
GTCAGAATGGCAGAGTGGTGATGCTTTCGGCTGCAACCCGGAATTATGTGAGTTCGATTT
TCGCTTCTGACTttt
Downstream region at tRNA end position 
aaacagttta
Secondary structure (Cloverleaf model)
>W1930009742	Cys	GCA
                   t      Tttt aaacagttta
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     A - T
                     A - T          T T
                    T     C G C T T     A
        G A        G      | + | | +     G
      T     G A C G       G T G A G     C
      G       | | |                 T T
      G     A T G C
        T G        T     ATTAT
                    T - A
                    T + G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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