The detailed information of tRNA gene sequence


Sequence ID>W1930034070
Genome IDOCMP01000004
Search identical group
Phylum/ClassUnclassified
Speciesbacterium JGI 053 [OCMP]
Start position on genome 106029
End posion on genome 105942
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtcgaagtct
tRNA gene sequence 
GGGAGGTTGGCAGAGCGGCCGATTGCGCCCGTCCCGAAAACGGGAGCTCCTTCACCGGGG
CCGGGGGTTCGAATCCCTCACCTCCCTCtt
Downstream region at tRNA end position 
cgttgtcacc
Secondary structure (Cloverleaf model)
>W1930034070	Ser	CGA
                   t      TCtt cgttgtcacc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    C       T T G C
      C G A        G     AGCTCCTTCACCGGGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  C       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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