The detailed information of tRNA gene sequence


Sequence ID>W1930039359
Genome IDQXIK01000006
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula sp. Atlit-7R [QXIK]
Start position on genome 257687
End posion on genome 257602
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctcaccgtt
tRNA gene sequence 
GGCAGGGTTTCCCTAGTTCGGCCAAGGGGCCGTGTTGGAACCACGGTGCTCGCGAGGGCA
CGGGTGTTCAAATCGCCCTCCCGCCCtca
Downstream region at tRNA end position 
gatggattcg
Secondary structure (Cloverleaf model)
>W1930039359	Ser	GGA
                   t      Ctca gatggattcg
                     G - C
                     G - C
                     C - G
                     A   C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C G C     A
    T G A T        T      | | | + |     A
  T         C C C T       G G G T G     C
  C           | | +                 T T
  G         A G G G
    G C C A        G     TGCTCGCGAGGGCAC
                    C - G
                    C - G
                    G - C
                    T - A
                    G - C
                  T       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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