The detailed information of tRNA gene sequence


Sequence ID>W1930021038
Genome IDNEWJ01000007
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum sp. SD683 [NEWJ]
Start position on genome 34775
End posion on genome 34861
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctcactgtt
tRNA gene sequence 
GGCGGGATTTCCCCACCCCGGCCAAGGGACCGCGTTGGAAGCGCGGCGTCCGCGAGGACA
CGAGTGTTCAAATCGCTCTCCGGCCGCtg
Downstream region at tRNA end position 
cgtgccgaag
Secondary structure (Cloverleaf model)
>W1930021038	Ser	GGA
                   t      GCtg cgtgccgaag
                     G - C
                     G - C
                     C - G
                     G   G
                     G - C
                     G - C
                     A - T          T A
                    T     C T C G C     A
    C C A C        T      | | | + |     A
  C         C C C T       G A G T G     C
  C           | | +                 T T
  G         A G G G
    G C C A        A     CGTCCGCGAGGACAC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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