The detailed information of tRNA gene sequence


Sequence ID>W1930009176
Genome IDFZNK01000013
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum ezzemoulense DSM 19316 [FZNK]
Start position on genome 12112
End posion on genome 12198
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctcaccgtt
tRNA gene sequence 
GGCGGGGTTTCCCTAGCTTGGTCAAGGGACTGCGTTGGAACCGCAGCGTCCGCAAGGACA
CGAGTGTTCAAATCGCTCTCCCGCCGCtg
Downstream region at tRNA end position 
cgtgccaaag
Secondary structure (Cloverleaf model)
>W1930009176	Ser	GGA
                   t      GCtg cgtgccaaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C G C     A
    C G A T        T      | | | + |     A
  T         C C C T       G A G T G     C
  T           | | +                 T T
  G         A G G G
    G T C A        A     CGTCCGCAAGGACAC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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