The detailed information of tRNA gene sequence


Sequence ID>W1930009804
Genome IDJOTD01000085
Search identical group
Phylum/ClassNitrososphaerota
SpeciesMarine Group I thaumarchaeote SCGC RSA3 [JOTD]
Start position on genome 48650
End posion on genome 48576
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gtatttcaat
tRNA gene sequence 
GGGCCGGTAGTCTAGCTGGTTAGGATACCGCCTCGACACGGCGGTGATCGTGAGTTCGAA
TCTCTCTCGGCCCACtt
Downstream region at tRNA end position 
tttaattaaa
Secondary structure (Cloverleaf model)
>W1930009804	Val	GAC
                   t      ACtt tttaattaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T A
                    T     C T C T C     A
      C G A        A      |   | | |     G
    T       T C T G       G T G A G     C
    G       + | | +                 T T
    G       G G A T
      T T A        A     TGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  C       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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