The detailed information of tRNA gene sequence


Sequence ID>W143001942
Genome IDAVLR01000135
Search identical group
Phylum/ClassBacillota
SpeciesClostridioides difficile P8 [AVLR]
Start position on genome 91563
End posion on genome 91467
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttcattat
tRNA gene sequence 
GGGAGTGGATGGGTGCCGGTGTGCCCTCTAGTCTTCAAAACTAGTATGAGGGGTTAAGAG
CCTCTTAGGTGGGTTCGATCCCCACGCATCCCCGCCA
Downstream region at tRNA end position 
atatgtaaaa
Secondary structure (Cloverleaf model)
>W143001942	SeC	TCA
                   t      GCCA atatgtaaaa
                     G - C
                     G - C
                     G - C
                     A   C
                     G + T
                     T - A
                     G - C
                     G   G          C T
                    A     C A C C C     A
      C C G        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          T     TATGAGGGGTTAAGAGCCTCTTAG
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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