The detailed information of tRNA gene sequence


Sequence ID>W143009576
Genome IDJDFL01000031
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus VPCR-2009 [JDFL]
Start position on genome 593
End posion on genome 509
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
nnnTAGGAAGTGGCGGAATTGGTAGACGCACCAGATTTAGGTTCTGGCGCCGCAAGGTGT
GAGAGTTCAAGTCTCTCCTTCCGCACCA
Downstream region at tRNA end position 
tcttgattca
Secondary structure (Cloverleaf model)
>W143009576	Leu	TAG
                   n      ACCA tcttgattca
                     n   C
                     n   G
                     n   C
                     T   C
                     A - T
                     G + T
                     G - C          T G
                    A     C T C T C     A
      G G C        A      | | | | |     A
    A       G G T G       G A G A G     C
    A       +   +                   T T
    T       T A G A
      T G G        C     TGGCGCCGCAAGGTGT
                    G - C
                    C   T
                    A - T
                    C - G
                    C - G
                  A       A
                  G       T
                    A T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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