The detailed information of tRNA gene sequence


Sequence ID>R05100004
Genome IDAP008207
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr01
Start position on genome 1774493
End posion on genome 1774571
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
atgatttaccagtgtaagttgttgctctggtcatgttgtactaatgcagtttagtaagaacaaagctaacataacaagtgccgttttgcgagctaacagT
tRNA gene sequence 
GCTTTCGTAGCTCAGTTGGTTAGAGCACCCGTTTAGTAAGCGGGAGGTCTTGAGTTCGAC
TCTCAACGAAAGCATAT
Downstream region at tRNA end position 
Ttttattatgaaaagaatccataattctattcattttattttctgtttcttccagtttttttccattacgcaaatgttgtaaccctacttattttctaga
Secondary structure (Cloverleaf model)
>R05100004	Thr	AGT
                   T      ATAT Ttttattatgaaaagaatccataattctattcattttattttctgtttcttccagtttttttccattacgcaaatgttgtaaccctacttattttctaga
                     G - C
                     C - G
                     T - A
                     T - A
                     T - A
                     C - G
                     G - C          T C
                    T     A A C T C     A
      T G A        A      | | | | |     G
    T       C T C G       T T G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    T + G
                  T       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK