The detailed information of tRNA gene sequence


Sequence ID>R05100018
Genome IDAP008207
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr01
Start position on genome 28969638
End posion on genome 28969713
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
ccagtgcttgaaataactaaatctttgggcaccgaaattacaattctcttggtcattcattttaactaaagaaaaatagtatgtcacattaagcatccag
tRNA gene sequence 
GACTCCGTGGCCCAATGGATAAGGCGCTGGTCTACGGAACCAGAGATTCTGGGTTCGATC
CCCAGCGGAGTCGTTC
Downstream region at tRNA end position 
ttttgtctctctttttttcactctctcattttaagtttttccagttcagttataatggttcttttgtttgctcgaaatgtgaataatcaaactcgcttta
Secondary structure (Cloverleaf model)
>R05100018	Arg	ACG
                   g      GTTC ttttgtctctctttttttcactctctcattttaagtttttccagttcagttataatggttcttttgtttgctcgaaatgtgaataatcaaactcgcttta
                     G - C
                     A - T
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C          C T
                    T     G A C C C     A
      T A A        G      | | | | |     G
    G       C C C G       C T G G G     C
    G         | | |                 T T
    A       A G G C
      T A          G     AGATT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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