The detailed information of tRNA gene sequence


Sequence ID>R05100024
Genome IDAP008207
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr01
Start position on genome 34069519
End posion on genome 34069593
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
gtttcgtgaaatttactcttgttttattttatctgtgtgcttaggtagaatctcaagaaataactaatttaaaggatgaaagtcacggtgtgtcacaaat
tRNA gene sequence 
GGTCCCATGGTCTAGCGGTTAGGACATTGGACTCTGAATCCAGCAACCCGAGTTCAAATC
TCGGTGGGACCTTTT
Downstream region at tRNA end position 
ttttctcgtaaatttttgcttgctgctgtagtctttgcgtgtgccaccgaattaaagaagtacgaattccaaaaatatcaaaacatgttacgatataaaa
Secondary structure (Cloverleaf model)
>R05100024	Gln	CTG
                   t      TTTT ttttctcgtaaatttttgcttgctgctgtagtctttgcgtgtgccaccgaattaaagaagtacgaattccaaaaatatcaaaacatgttacgatataaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G C T C     A
      C G A        G      | | | | |     A
    G       T C T G       C C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    T + G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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