The detailed information of tRNA gene sequence


Sequence ID>R05100026
Genome IDAP008207
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr01
Start position on genome 35250938
End posion on genome 35251023
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ctagcaaatctaatagttcccatctgctcttcttaacttaagaacgaaggtccttcttattcaggaaccctttgtttgaggggggcgtatccccggggag
tRNA gene sequence 
GGGAGAGTGGCCGAGCGGTCAAAAGCGACAGACTGTAAATCTGTTGAAGGTTTTCTACGT
AGGTTCGAATCCTGCCTCTCCCACTT
Downstream region at tRNA end position 
gttgtagacttaagagaagagaaagtaggcggaagcctaggagggccaaccgagcgaagctctttctttttttggccgtgccgtgaagtgcaattttctc
Secondary structure (Cloverleaf model)
>R05100026	Tyr	GTA
                   g      ACTT gttgtagacttaagagaagagaaagtaggcggaagcctaggagggccaaccgagcgaagctctttctttttttggccgtgccgtgaagtgcaattttctc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | + | | |     G
    G       G C C G       G T A G G     C
    G           | |                 T T
    T       A A G C
      C A A        G     TGAAGGTTTTCTAC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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