The detailed information of tRNA gene sequence


Sequence ID>R05100033
Genome IDAP008207
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr01
Start position on genome 37746144
End posion on genome 37746221
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
cattggccttgttagttgtttcctctgcctcttgaaagctaggacatggatgcagatggcttttatgtatcaaaatttaattgtgtatgcaagccaacaC
tRNA gene sequence 
GATCATATAGCGAAGTGGATATCGCGTTAGATTCCGAATCTAAAAGTCGTGGGTTCGAAT
CCCACTATGATCGATT
Downstream region at tRNA end position 
Tcccttggcttttatttttccttcttgtttctggtgttctgttttcagctgacagggacatattggcatcatccacaagggcacgaggtattcagagttc
Secondary structure (Cloverleaf model)
>R05100033	Arg	CCG
                   C      GATT Tcccttggcttttatttttccttcttgtttctggtgttctgttttcagctgacagggacatattggcatcatccacaagggcacgaggtattcagagttc
                     G - C
                     A - T
                     T - A
                     C - G
                     A - T
                     T - A
                     A - T          T A
                    T     C A C C C     A
      T G A        A      | | | | |     G
    G       A G C G       G T G G G     C
    G       | | | |                 T T
    A       T C G C
      T A          G     AAGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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