The detailed information of tRNA gene sequence


Sequence ID>R05100065
Genome IDAP008207
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr01
Start position on genome 35235499
End posion on genome 35235411
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tttcaaggaggcagcggggattcgacttcccctgggggtagggagtattatgaaaggaggttaatcatagattatcaaaaaccctagaataaattcttcT
tRNA gene sequence 
GGGTCGATGCCCGAGCGGTTAATGGGGACGGACTGTAAATTCGTTGACAATATGTCTACG
CTGGTTCAAATCCAGCTCGGCCCAAAA
Downstream region at tRNA end position 
Atctagggcttcgtgaatatgagttaaatccattttttttcttccataaaaaagaatatttgatccatagaaataaaagaaataaaggataaaaagaaaa
Secondary structure (Cloverleaf model)
>R05100065	Tyr	GTA
                   T      AAAA Atctagggcttcgtgaatatgagttaaatccattttttttcttccataaaaaagaatatttgatccatagaaataaaagaaataaaggataaaaagaaaa
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C T G G     C
    G       + | | |                 T T
    T       T G G G
      T A A        G     TGACAATATGTCTAC
                    A - T
                    C - G
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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