The detailed information of tRNA gene sequence


Sequence ID>R05100080
Genome IDAP008207
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr01
Start position on genome 5004726
End posion on genome 5004652
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
cctaccaagagaataccccccatttttatgtaattgaagtaggattgacgaataagaaataaacataatactgtttattagtgtcgcataaaacccgaaa
tRNA gene sequence 
TGGGGCGTGGCCAATTGGTAAGGCAGCGGGTTTTGGTCCCGTTACTCGGAGGTTCGAATC
CTTCCGTCCCAGATT
Downstream region at tRNA end position 
ttttctgatgaaacgaaagatgaaatcgtattgtattctgcacgagacataaattttattaaagagattttttttcttttctttcagtcataagtatctg
Secondary structure (Cloverleaf model)
>R05100080	Gln	TTG
                   a      GATT ttttctgatgaaacgaaagatgaaatcgtattgtattctgcacgagacataaattttattaaagagattttttttcttttctttcagtcataagtatctg
                     T - A
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C T T C C     A
        T A        G      | + | | |     G
      T     A C C G       G G A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TACTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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