The detailed information of tRNA gene sequence


Sequence ID>R05100093
Genome IDAP008217
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr11
Start position on genome 26314802
End posion on genome 26314878
Amino Acid Pro
Anticodon AGG
Upstream region at tRNA start position 
atgttaacccaaacatcacccacactaaataaatcatttaccactgtactgacccagttttccatgtcccaaaactttgcacatatgcaaagcagacagT
tRNA gene sequence 
GGGGATTTAGTCTAGTGGTAAGATATTCGCTTAGGGAGCGAAAGGTCCCGAGTTCAATTC
TCGGAATCCCCAGTC
Downstream region at tRNA end position 
Tgaaattttttttgggaagtttgatgtgaagaaccaaatattgtagaatgatattcagaaataagatgataaggtctggagtctggacaatggaatctgg
Secondary structure (Cloverleaf model)
>R05100093	Pro	AGG
                   T      AGTC Tgaaattttttttgggaagtttgatgtgaagaaccaaatattgtagaatgatattcagaaataagatgataaggtctggagtctggacaatggaatctgg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     T - A          T T
                    T     G G C T C     A
        G A        A      | | | | |     A
      T     T C T G       C C G A G     C
      G     | | | +                 T T
      G     A G A T
        T A        A     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    A G G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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