The detailed information of tRNA gene sequence


Sequence ID>R05100105
Genome IDAP008217
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr11
Start position on genome 16694652
End posion on genome 16694576
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagtatgtagtatatgattcgtctatttcttagagtaggacaggcgaatattcttattcttatggttccatttaagaataagtatgccatacgccccgcg
tRNA gene sequence 
GGGATTGTAGTTCAATTGGTCAGAGCACCGCCCTGTCAAGGCGGAAGCTGTGGGTTCGAG
CCCCGTCAGTCCCGAAC
Downstream region at tRNA end position 
tagggttcaatgaatggagaaattcatctttcctttttccatgaaaaaaggggggcaggaagcaagatcaaatacctatggggtacccctatttcacttt
Secondary structure (Cloverleaf model)
>R05100105	Asp	GTC
                   g      GAAC tagggttcaatgaatggagaaattcatctttcctttttccatgaaaaaaggggggcaggaagcaagatcaaatacctatggggtacccctatttcacttt
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T A A        A      + + | | |     G
    T       C T T G       G T G G G     C
    G       | | + |                 T T
    G       G A G C
      T C A        A     AAGCT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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