The detailed information of tRNA gene sequence


Sequence ID>R05100112
Genome IDAP008218
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr12
Start position on genome 625416
End posion on genome 625502
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atggacctttctatcatcatcatatacgcggttgatctttttgttgatggtgtagttggttcagctagttaaatagtaatcacaaaactcgaaacaagaC
tRNA gene sequence 
GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTTCGCCCGCGCA
GGTTCGAACCCTGCTGTCGACGACC
Downstream region at tRNA end position 
Atttttttttaggctttttaatctttggaaaaggtacaccgaaggtcccccaacagcccaacttatcatcgaattaaaaaatagtccccctaccgcaaaa
Secondary structure (Cloverleaf model)
>R05100112	Ser	TGA
                   C      GACC Atttttttttaggctttttaatctttggaaaaggtacaccgaaggtcccccaacagcccaacttatcatcgaattaaaaaatagtccccctaccgcaaaa
                     G - C
                     T - A
                     C - G
                     G - C
                     A - T
                     T + G
                     A - T          C A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C A G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTTCGCCCGC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK