The detailed information of tRNA gene sequence


Sequence ID>R05100122
Genome IDAP008218
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr12
Start position on genome 11292080
End posion on genome 11292155
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gctttctttgtacaatgcataggactgacccctccccatttccaaattttggatattgacatagatacaaatactctactaggatgatgcacaagaaaag
tRNA gene sequence 
GTCAGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAGTTCAAAT
CTGGTTCCTGGCACAG
Downstream region at tRNA end position 
aaaaaagggatcttccgaataggtattgatacaaatacctcgagatgggttgggatacatattcgttaataatatagatagagtatgattttttcatcta
Secondary structure (Cloverleaf model)
>R05100122	Phe	GAA
                   g      ACAG aaaaaagggatcttccgaataggtattgatacaaatacctcgagatgggttgggatacatattcgttaataatatagatagagtatgattttttcatcta
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     T G G T C     A
      T G A        A      | | | | |     A
    T       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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