The detailed information of tRNA gene sequence


Sequence ID>R05100128
Genome IDAP008218
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr12
Start position on genome 20677439
End posion on genome 20677514
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
agccccatacggagccgcgcccttgtgatatgataagaagaaaaggggccaggccgccctcttttcttttccgcaccaagccttctcttcttgtaaaatc
tRNA gene sequence 
GGGTGTATAGCTCAGTTGGTAGAGCATTGGGCTTTTAACCTAATGGTCGCAGGTTCAAGT
CCTGCTATACCCAAAA
Downstream region at tRNA end position 
aaaaccactcttgtattcgtaaggatgcatagtagccttcaaagagcactctttggccttgagactcgcccctttctcatcaacatctcgacttcgctcg
Secondary structure (Cloverleaf model)
>R05100128	Lys	TTT
                   c      AAAA aaaaccactcttgtattcgtaaggatgcatagtagccttcaaagagcactctttggccttgagactcgcccctttctcatcaacatctcgacttcgctcg
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T
                     T - A
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    T - A
                    T - A
                    G + T
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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