The detailed information of tRNA gene sequence


Sequence ID>R05100132
Genome IDAP008218
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr12
Start position on genome 20703238
End posion on genome 20703314
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gaaaaccttgcagcttacttgctatatccccgcgtccttgcacggctcgttttcttcgagccctgcttctcccttccccctctccccgggaaccgaccgT
tRNA gene sequence 
TGGAGTATAGCCAAGTGGTAAGGCATCGGTTTTTGGTACCGGCATGCAAAGGTTCGAATC
CTTTTACTCCAGAGC
Downstream region at tRNA end position 
Atacttattataaaaatatataagaaagtctcatccctaataaataaatgaaagtagatttacattcttattctatttctagggggaatgttgaggcaaa
Secondary structure (Cloverleaf model)
>R05100132	Gln	TTG
                   T      GAGC Atacttattataaaaatatataagaaagtctcatccctaataaataaatgaaagtagatttacattcttattctatttctagggggaatgttgaggcaaa
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     T T T C C     A
        G A        A      | | | | |     G
      T     A C C G       A A A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATGC
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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