The detailed information of tRNA gene sequence


Sequence ID>R05100150
Genome IDAP008218
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr12
Start position on genome 20981112
End posion on genome 20981027
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cgataggcagagcaaatacgccttcaggctaagattacgtacacccgccttatcaagtgaaaacattatataaaaactggaggaagaaaaaactcaacta
tRNA gene sequence 
GCTGGTTTGCCCGAGTGGTTAAGGGGGAAGACTTAAGATCTTCTGCACTGAAGTGCGCGT
GGGTTCGAACCCCACAGCCAGCATAA
Downstream region at tRNA end position 
aatttttgaactcaattttattctaatcttttgaactttttcatttgaattgtttgaactcaatttattctaatcttttgaaccttttcaaattaatatt
Secondary structure (Cloverleaf model)
>R05100150	Leu	TAA
                   a      ATAA aatttttgaactcaattttattctaatcttttgaactttttcatttgaattgtttgaactcaatttattctaatcttttgaaccttttcaaattaatatt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T + G
                     T - A          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | | |                 T T
    T       A G G G
      T A          G     TGCACTGAAGTGCGC
                    G - C
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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