The detailed information of tRNA gene sequence


Sequence ID>R05100158
Genome IDAP008218
Search identical group
Phylum/ClassPlant
SpeciesOryza sativa Japonica Group
Chromosome chr12
Start position on genome 11290448
End posion on genome 11290371
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tcgaactagttaatagctaagattaataattaagatatgacattttacggatttcctatactatacatatttctatttgttacactatttctgttatgtA
tRNA gene sequence 
GCCCACTTAGCTCAGAGGTTAGAGCATCGCATTTGTAATGCGAGGGTCATCGGTTCAAAT
CCAATAGTCGGCTTTT
Downstream region at tRNA end position 
Ttctctatcaatgttccatgaacaaaaatacctctttttctccgaattaaatggagaagccaggaggctgagacgccgctcttgctccgcgcgcgctcac
Secondary structure (Cloverleaf model)
>R05100158	Thr	TGT
                   A      TTTT Ttctctatcaatgttccatgaacaaaaatacctctttttctccgaattaaatggagaagccaggaggctgagacgccgctcttgctccgcgcgcgctcac
                     G - C
                     C - G
                     C - G
                     C   C
                     A - T
                     C - G
                     T - A          T A
                    T     T A A C C     A
      A G A        A      | |   | |     A
    G       C T C G       A T C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[RAP-DB]

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